Well
NUclearBunnie,
It seems that you are limited in the number of resister values you have and quantity, since you are creating a 320ohm resistance with 2 values
200 and 120 (are you sure you have a 200ohm and not 220ohm?).
Your RED circuit seems to work well with the 320ohm resistance by itself.
As soon as you ADD the Blue LEDs to that circuit, it changes everything and the BLUE LED's come on excluding the RED LED's
because the current takes a new path.
You need to block some of that current flow with resistance and allow some of the current to flow through the RED LED's as well.
Actually, the best way would be to have lower value resisters for
every LED you have (12 resisters).
Since the Red and Blue LED lines seem to work individually and adequately at 320ohm,
you
at the very least need to put resistance in line with the first and second groups of RED LED's
as well as resistance in line with the first and second groups of BLUE LED's.
That would allow current to have
two paths with there own 320ohm resistance.
NEVER connect your LED's straight to the 9v without the proper resistance!
.